Dépendances inversées pour bio Latest version of the following gems require bio
rbbt-sources 3.4.2
Data sources like PubMed, Entrez Gene, or Gene Ontology
239 358 Téléchargements
mspire 0.10.8.0
mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms...
223 109 Téléchargements
snp-search 2.12.0
Use the snp-search tool to create, import, manipulate and query your SNP database
130 248 Téléchargements
bio-samtools 2.6.2
Binder of samtools for ruby, on the top of FFI. This project was born from the need...
123 383 Téléchargements
bio-polyploid-tools 1.2.1
Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat
120 216 Téléchargements
bacterial-annotator 1.0.1
GEM to annotate bacterial genome sequence based on a reference genome and complete the ...
107 114 Téléchargements
protk 1.4.4
Commandline tools for proteomics
98 657 Téléchargements
parse_fasta 2.5.2
Provides nice, programmatic access to fasta and fastq files, as well as providing Seque...
86 881 Téléchargements
bio-gadget 0.5.0
Gadgets for bioinformatics
84 103 Téléchargements
iroki 0.0.36
Command line app and library code for Iroki, a phylogenetic tree customization program.
80 118 Téléchargements
transrate 1.0.1
a library and command-line tool for quality assessment of de-novo transcriptome assemblies
77 386 Téléchargements
bio-ucsc-api 0.6.5
Ruby UCSC API: accessing the UCSC Genome Database using Ruby
75 748 Téléchargements
bio-svgenes 0.4.1
This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...
61 250 Téléchargements
ms-core 0.0.19
basic, shared functionality for mspire libraries.
56 068 Téléchargements
biointerchange 1.0.8
BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...
48 510 Téléchargements
crb-blast 0.6.9
See summary
47 371 Téléchargements
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
45 744 Téléchargements
wrnap 1.2.2
A comprehensive wrapper w(RNA)pper for various RNA CLI programs.
45 611 Téléchargements
bio-basespace-sdk 0.1.7
BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...
42 465 Téléchargements
full_lengther_next 1.0.6
FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...
41 958 Téléchargements
bio-band 0.1.11
Data mining and machine learning algorithms for JRuby
38 804 Téléchargements
genevalidatorapp 2.1.8
A Web App wrapper for GeneValidator, a program for validating gene predictions.
38 521 Téléchargements
fasta_util 0.5.2
Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on th...
37 689 Téléchargements
genevalidator 2.1.5
The tool validates the input predicted genes and provides useful information (length va...
37 551 Téléchargements
rbfam 12.0.1.1
Light wrapper for RFam data in Ruby.
37 397 Téléchargements
bio-publisci 0.1.0
A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...
32 472 Téléchargements
ulla 0.9.9.2
'ulla' is a program for calculating environment-specific substitution tables from user ...
31 318 Téléchargements
bio-faster 0.4.5
A fast parser for FastQ files
30 579 Téléchargements
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
30 558 Téléchargements
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
30 558 Téléchargements