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full_lengther_next 1.0.6

FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and in a distributed way to minimise computing time. It is able to classify unigenes to full-length, 5’-end, 3’-end and internal, suggesting which unknown genes are coding or not. It will be also shown that FULL-LENGTHERNEXT fixes frame shifts, one of the main mistake found in wrong entries of full-length sequences databases, and it is a fast tool to compare different transcriptome assemblies.

Gemfile:
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install:
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Versions:

  1. 1.0.6 February 22, 2024 (68.5 KB)
  2. 1.0.5 May 10, 2023 (68.5 KB)
  3. 1.0.4 September 07, 2022 (68.5 KB)
  4. 1.0.3 September 07, 2022 (68.5 KB)
  5. 1.0.2 September 05, 2022 (68.5 KB)
Show all versions (19 total)

Runtime Dependencies (7):

bio ~> 2.0.4
scbi_blast >= 0
scbi_fasta >= 0
scbi_zcat >= 0
xml-simple >= 0

Development Dependencies (3):

bundler ~> 1.12
rake ~> 10.0
rspec ~> 3.0

Owners:

Pushed by:

Authors:

  • Pedro Seoane, Noe Fernandez, Dario Guerrero

SHA 256 checksum:

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Total downloads 41,164

For this version 322

Version Released:

License:

MIT

Required Ruby Version: >= 0

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