DEPRECATED PROJECT. MIGRATED TO PYTHON: https://github.com/seoanezonjic/pets. PETS suite includes three different tools. CohortAnalyzer performs the calculation of several statistics that gives an overview of a cohort of patients to analyse. Reg2Phen uses associations between pathological phenotypes and regions of the genome (these associations can be calculated from the cohort of patients if they include genotypic & phenotypic information using NetAnalyzer, another Ruby gem) to find, for a given genomic region, which pathological phenotypes have been associated with that region. The third tool, Phen2Reg, is a predictor that using the same associations as Reg2Phen, predicts which genomic regions can be the cause of a list of pathological phenotypes observed in a patient.

Required Ruby Version

>= 0

Authors

Elena Rojano, Pedro Seoane

Versions

  1. 0.2.7

    1. source

      1. 0.2.7 source September 02, 2025 (134 MB)
  2. 0.2.6

    1. source

      1. 0.2.6 source September 02, 2025 (134 MB)
  3. 0.2.5

    1. source

      1. 0.2.5 source August 04, 2023 (134 MB)
  4. 0.2.4

    1. source

      1. 0.2.4 source May 23, 2022 (134 MB)
  5. 0.2.3

    1. source

      1. 0.2.3 source June 09, 2021 (134 MB)
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