RubyGems Navigation menu

pets 0.2.7

DEPRECATED PROJECT. MIGRATED TO PYTHON: https://github.com/seoanezonjic/pets. PETS suite includes three different tools. CohortAnalyzer performs the calculation of several statistics that gives an overview of a cohort of patients to analyse. Reg2Phen uses associations between pathological phenotypes and regions of the genome (these associations can be calculated from the cohort of patients if they include genotypic & phenotypic information using NetAnalyzer, another Ruby gem) to find, for a given genomic region, which pathological phenotypes have been associated with that region. The third tool, Phen2Reg, is a predictor that using the same associations as Reg2Phen, predicts which genomic regions can be the cause of a list of pathological phenotypes observed in a patient.

Gemfile:
=

installation:
=

Versions:

  1. 0.2.7 September 02, 2025 (134 Mo)
  2. 0.2.6 September 02, 2025 (134 Mo)
  3. 0.2.5 August 04, 2023 (134 Mo)
  4. 0.2.4 May 23, 2022 (134 Mo)
  5. 0.2.3 June 09, 2021 (134 Mo)
Voir toutes les versions (8)

Dépendances de Runtime (12):

bio-vcf >= 0
expcalc >= 0
net-ftp >= 0
net-http >= 0
npy >= 0
parallel ~> 1.20.1
semtools ~> 0.1.0

Dépendances de Development (3):

bundler ~> 2.0
rake ~> 13.0.3
rspec ~> 3.11.0

Propriétaires:

Pushed by:

Auteurs:

  • Elena Rojano, Pedro Seoane

Total de contrôle SHA 256:

=

Total de téléchargements 10 285

Pour cette version 146

Version publiée:

License:

MIT

Version de Ruby requise: >= 0

Liens: