full_lengther_next 0.6.1
FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and in a distributed way to minimise computing time. It is able to classify unigenes to full-length, 5’-end, 3’-end and internal, suggesting which unknown genes are coding or not. It will be also shown that FULL-LENGTHERNEXT fixes frame shifts, one of the main mistake found in wrong entries of full-length sequences databases, and it is a fast tool to compare different transcriptome assemblies.
Gemfile:
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install:
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Runtime Dependencies (7):
bio
>= 1.4.3
bio-cd-hit-report
>= 0.1.0
scbi_blast
>= 0.0.32
scbi_mapreduce
>= 0.0.29
scbi_plot
>= 0.0.6
scbi_zcat
>= 0
xml-simple
>= 1.0.12
Owners:
Authors:
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Pedro Seoane & Noe Fernandez & Dario Guerrero
SHA 256 checksum:
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